Microbiology

Organisational unit: Unit

  1. Master's thesis › Research
  2. De invloed van toxische metaalconcentraties op Cupriavidus metallidurans CH34

    Martens, I. & Leys, N., 19 Jun 2015, Hasselt, Belgium: UHasselt - Universiteit Hasselt. 100 p.

    Research output: ThesisMaster's thesis

  3. Diversité microbienne dans les milieux karstiques

    Gerin, X. & Moors, H., 5 Sep 2012, Liège, Belgium: ULg - Université de Liège. 70 p.

    Research output: ThesisMaster's thesis

  4. Effect van gesimuleerde micrograviteit op het gedrag van de bacterie Cupriavidus Metallidurans CH34

    Crabbé, A., De Boever, P. & Mergeay, M., Jun 2005, Brussels, Belgium: VUB - Vrije Universiteit Brussel. 64 p.

    Research output: ThesisMaster's thesis

  5. Impact of oxygen on cyanobacterium Arthrospira sp. PCC 8005

    Garcia, J. & Leys, N., 23 Jun 2015, Bilao, Spain: UC - University of Cantabria. 39 p.

    Research output: ThesisMaster's thesis

  6. Investigations on the potential radio-protective properties of edible Cyanobacterium during pelvic irradiation in a mouse model

    Beeck, W. V., Verslegers, M. & Mastroleo, F., 24 Jun 2016, 76 p.

    Research output: ThesisMaster's thesis

  7. Microbial interaction with bituminous materials used in radioactive waste disposal

    Tangie Ngwa, T. B. & Mijnendonckx, K., 31 May 2017

    Research output: ThesisMaster's thesis

  8. Onderzoek naar het fycocyaninepigment van Arthrospira sp. PCC 8005, een stralingresistente cyanobacterie, geslecteerd als voedingssupplement voor ruimtemissies.

    Ramaekers, S., Vanhoudt, N., Suetens, A. & Dingemans, J., 11 Jun 2014, Hasselt, Belgium: UGent - Universiteit Gent. 110 p.

    Research output: ThesisMaster's thesis

  9. Possible scenarios to cultivate cyanobacteria on the Moon for life support

    Schokaert, T. & Mastroleo, F., 26 Aug 2013, Leuven, Belgium: KUL - Katholieke Universiteit Leuven. 93 p.

    Research output: ThesisMaster's thesis

  10. Stress-induced mutagenesis in Cupriavidus metallidurans strains

    Poppe, M., Vandecraen, J., Van Houdt, R., Mijnendonckx, K. & Moors, H., Jun 2014, Leuven, Belgium: KUL - Katholieke Universiteit Leuven. 96 p.

    Research output: ThesisMaster's thesis

  11. Zoeken naar het 'Quorum Sensing' system van Cupriavidus metallidurans CH34 en de functie ervan op aarde en in de ruimte

    Moors, H. & De Boever, P., Jul 2007, Leuven, Belgium: KUL - Katholieke Universiteit Leuven. 84 p.

    Research output: ThesisMaster's thesis

  12. Doctoral thesis › Research
  13. « Etude fonctionnelle des gènes plasmidiques de résistance au cuivre de Cupriavidus metallidurans : Aspects physiologique, biochimique et écologique »

    van Aelst, S. & Mergeay, M., 21 Apr 2008, Brussels, Belgium: ULB - Université Libre de Bruxelles. 167 p.

    Research output: ThesisDoctoral thesis

  14. Adaptation of Pseudomonas aeruginosa to the cystic fibrosis lung and the role of shear stress in disrupting alginate matrix biofilms

    Dingemans, J. & Van Houdt, R., Oct 2015, Brussels, Belgium: VUB - Vrije Universiteit Brussel. 233 p.

    Research output: ThesisDoctoral thesis

  15. Adaptive silver resistance in Cupriavidus metallidurans

    Mijnendonckx, K. & Van Houdt, R., Nov 2013, Louvain-la-Neuve, Belgium: UCL - Université Catholique de Louvain. 258 p.

    Research output: ThesisDoctoral thesis

  16. Bioinformatics tools for metagenomic analysis of bacterial communities

    Goussarov, G. & Van Houdt, R., 9 Nov 2021, UGent - Universiteit Gent. 178 p.

    Research output: ThesisDoctoral thesis

  17. Genomic plasticity of Cupriavidus metallidurans in response to environmental stressors

    Vandecraen, J. & Van Houdt, R., 2 Jun 2016, 193 p.

    Research output: ThesisDoctoral thesis

  18. Interaction plantes - bactéries sur des substrats contaminés en cuivre; cas de l’arc cuprifère du Katanga

    Cubaka Kabagale, A. & Leys, N., 26 Aug 2010, Brussels, Belgium: ULB - Université Libre de Bruxelles. 204 p.

    Research output: ThesisDoctoral thesis

  19. Investigating microbial therapies to combat gut microbiome dysbiosis during pelvic irradiation

    Segers, C., Leys, N., Verslegers, M. & Mastroleo, F., 10 Jan 2022, UA - Universiteit Antwerpen. 249 p.

    Research output: ThesisDoctoral thesis

  20. Mechanisms of ionizing radiation resistance in Arthrospira sp. PCC 8005

    Yadav, A. & Janssen, P., 22 Dec 2021, UHasselt - Universiteit Hasselt. 214 p.

    Research output: ThesisDoctoral thesis

  21. Microbial dynamics in the aquatic environments of a nuclear reactor

    Van Eesbeeck, V. & Leys, N., 9 Jul 2021, 268 p.

    Research output: ThesisDoctoral thesis

  22. Microbial population and community dynamics in natural and managed freshwater systems: From methodology development to mechanistic insights

    Props, R., Leys, N. & Monsieurs, P., 7 Oct 2018, Gent: UGent - Universiteit Gent. 257 p.

    Research output: ThesisDoctoral thesis

  23. Molecular characterization of the life support bacterium Rhodospirillum rubrum S1H cultivated under space related environmental conditions

    Mastroleo, F. & Van Houdt, R., 23 Jan 2009, Mons, Belgium: HELHa - Haute Ecole Louvain en Hainaut. 171 p.

    Research output: ThesisDoctoral thesis

  24. Molecular investigation of radiation resistant cyanobacterium Arthrospira sp. PCC8005

    Badri, H., Janssen, P. & Mastroleo, F., 23 Jan 2015, Mons, Belgium: UMONS - Université de Mons. 291 p.

    Research output: ThesisDoctoral thesis

  25. Novel metal resistance mechanisms of Cupriavidus metallidurans

    Ali, M. M. & Van Houdt, R., 18 Nov 2019, 207 p.

    Research output: ThesisDoctoral thesis

  26. Organisation et expression des gènes de résistance aux métaux lourds chez Cupriavidus metallidurans CH34

    Monchy, S., Benotmane, R. & Janssen, P., 6 Jun 2007, Bruxelles, Belgium: ULB - Université Libre de Bruxelles. 98 p.

    Research output: ThesisDoctoral thesis

  27. Phenotypic adaptation and regulatory response to copper stress in Cupriavidus metallidurans

    Maertens, L. & Van Houdt, R., 25 Oct 2021, UNamur - Université de Namur. 198 p.

    Research output: ThesisDoctoral thesis

  28. Studies on the response to spaceflight related conditions in the cyanobacterium Arthrospira sp. PCC8005 using a genomic approach.

    Morin, N. & Leys, N., 16 Dec 2009, Liège, Belgium: ULg - Université de Liège. 262 p.

    Research output: ThesisDoctoral thesis

  29. The fate and effects of micropollutants in a biological life support system

    Pycke, B. & Leys, N., 15 Dec 2009, Gent, Belgium: UGent - Universiteit Gent. 187 p.

    Research output: ThesisDoctoral thesis

  30. The interaction of bacteria with volcanic rocks on Earth and in Space

    Byloos, B., Leys, N. & Van Houdt, R., 27 Sep 2017, 243 p.

    Research output: ThesisDoctoral thesis

  31. Uranium resistance in Cupriavidus metallidurans: from environmental relevance to potential applications

    Rogiers, T., Mijnendonckx, K. & Van Houdt, R., 27 Jan 2022, UGent - Universiteit Gent. 188 p.

    Research output: ThesisDoctoral thesis

  32. Book of abstracts › Research › Peer-reviewed
  33. Book of abstracts Day of the PhD's October 27, 2016

    Belmans, N., Ali, M. M., Baselet, B., Byloos, B., Mbouombouo Mfossa, A. C., Van Eesbeeck, V., Yadav, A. & Baatout, S., 27 Oct 2016, SCK CEN. (SCK•CEN Reports; no. SCK•CEN BA-0083)

    Research output: Report/bookBook of abstractspeer-review

  34. Cupriavidus metallidurans: a unique β-proteobacterium, appearing where you least expect it.

    Moors, H. & Leys, N., 18 Apr 2008, 0 ed. SCK CEN. 75 p. (SCK•CEN Reports; no. BA-22)

    Research output: Report/bookBook of abstractspeer-review

  35. Topical Day | Ionising radiation: how do bacteria cope and what can we learn?

    Janssen, P., Yadav, A., Van Houdt, R., Monsieurs, P., Mastroleo, F., Mijnendonckx, K. & Van Eesbeeck, V., 21 Apr 2017, SCK CEN. (SCK•CEN Reports; no. BA-88)

    Research output: Report/bookBook of abstractspeer-review

  36. Book of abstracts › Research › Not peer-reviewed
  37. Topical day: Aquatic microbiota in or near nuclear facilities: insights, discoveries, solutions

    Janssen, P., Coeck, M. & De Ceuster, J., 12 Sep 2019, SCK CEN. 27 p. (SCK CEN Book of abstract series; no. BA-136)

    Research output: Report/bookBook of abstracts

  38. Book as author › Research › Peer-reviewed
  39. Metal Response in Cupriavidus metallidurans, Volume I: From Habitats to Genes and Proteins

    Mergeay, M. (ed.) & Van Houdt, R. (ed.), Jul 2015, 1 ed. Switzerland: Springer. 89 p. (SpringerBriefs in Biometals)

    Research output: Report/bookBook as authorpeer-review

  40. Metal Response in Cupriavidus metallidurans, Volume II: Insights into the Structure-Function Relationship of Proteins

    Vandenbussche, G., Mergeay, M. & Van Houdt, R., Jul 2015, 1 ed. Switzerland: Springer. 70 p. (SpringerBriefs in Biometals)

    Research output: Report/bookBook as authorpeer-review

  41. ER - External report › Research › Peer-reviewed
  42. Boom Clay pore water analysis shows the presence of an active methanogenic microbial community

    Mijnendonckx, K., Honty, M., Jacops, E., Provoost, A., Wouters, K., Ahmed, M., De Craen, M. & Leys, N., 18 Jan 2021, SCK CEN. 33 p. (SCK•CEN Reports; no. ER-0858)

    Research output: Report/bookER - External reportpeer-review

  43. C0SMOS: Results of the first series of experiments

    Moors, H., Leys, N., Provoost, A. & Leysen, L., 1 Mar 2018, SCK CEN. 73 p. (SCK•CEN Reports; no. ER-0418)

    Research output: Report/bookER - External reportpeer-review

  44. COSMOS: Concept, design and use of the experimental infrastructure

    Moors, H., Smets, S., Verwimp, W., De Soete, H. & Leys, N., 1 Jan 2016, SCK CEN. 30 p. (SCK•CEN Reports; no. ER-308)

    Research output: Report/bookER - External reportpeer-review

  45. Description of the HADES piezometers used for the study of in situ Boom Clay pore water chemistry

    De Craen, M., Moors, H. & Verstricht, J., 3 Jun 2019, SCK CEN. 194 p. (SCK•CEN Reports; no. SCK•CEN ER-0329)

    Research output: Report/bookER - External reportpeer-review

  46. Overview of microbial analysis procedures used within µPraclay

    Mijnendonckx, K., Provoost, A., Moors, H., Wouters, K. & Leys, N., 11 Jul 2017, SCK CEN. 27 p. (SCK•CEN Reports; no. ER-0391)

    Research output: Report/bookER - External reportpeer-review

  47. Selected experiments for assessing the evolution of concrete, their mechanical safety functions and performance targets: EURAD Deliverable 16.3

    Neeft, E., de Bruin, T., van Kleef, R., Phung, Q. T., Perko, J., Seetharam, S., Mijnendonckx, K., Li, X. L., Hausmannová, L., Vašíček, R., Večerník, P., Hlaváčková, V., Černá, K., Černoušek, T., Helson, O., Bourbon, X., Zghondi, J., Vidal, T., Sellier, A., Shao, J. & 7 others, Rougelot, T., Jantschik, K., Kulenkampff, J., Deissmann, G., Griffa, M., Churakov, S. & Ma, B., 1 Jan 2022, EURAD - European Joint Programme on Radioactive Waste Management. 132 p.

    Research output: Report/bookER - External reportpeer-review

  48. THESEUS : Towards Human Exploration of Space - a EUropean Strategy

    Worms, J-C., Walter, N., White, O., Martinez-Schmitt, J., Marshall-Bowman, K., Blanc, S., Monken, I., Hockey, B., Reitz, G., Leys, N., Mastroleo, F., Comet, B., Gerzer, R., Horneck, G. & Baatout, S., Mar 2012, 0 ed. SCK CEN. 200 p. (SCK•CEN Reports; no. ER-1)

    Research output: Report/bookER - External reportpeer-review

  49. In-proceedings paper › Research › Peer-reviewed
  50. A global approach to asses stress response of the bioregenerative life support system organism Rhodospirillum rubrum under space-flight related environmental conditions.

    Hendrickx, L., Mastroleo, F., Baatout, S., Paillé, C., Mergeay, M. & Wattiez, R., 11 Jul 2005, A global approach to asses stress response of the bioregenerative life support system organism Rhodospirillum rubrum under space-flight related environmental conditions.. San Francisco, United States, p. 1-5

    Research output: Contribution to report/book/conference proceedingsIn-proceedings paperpeer-review

  51. A large-scale gene expression database on the effect of low doses of radiation: A systems biology approach

    Monsieurs, P., Quintens, R., Janssen, A., Michaux, A., Jacquet, P., Baatout, S., Benotmane, R. & Vanmarcke, H., 14 Jun 2010, Proceedings of the Third European IRPA Congress. Helsinki, Finland, p. 1-10

    Research output: Contribution to report/book/conference proceedingsIn-proceedings paperpeer-review

  52. A talk during dinner can be life-saving for bacteria

    Moons, P., Wevers, E., Van Houdt, R., Aertsen, A., Michiels, C. W. & Leys, N., Oct 2007, Communications in Agricultural and Applied Biological Science. Ghent, Belgium, p. 47-50 (Communications in Agricultural and Applied Biological Science; no. 72(1)).

    Research output: Contribution to report/book/conference proceedingsIn-proceedings paperpeer-review

  53. Boom Clay borehole water, home of a diverse bacterial community

    Wouters, K., Moors, H. & Leys, N., Sep 2013, Proceedings of the ASME 2013 15th International Conference on Environmental Remediation and Radioactive Waste Management - ICEM 2013 (on CD). United States, p. 1-2

    Research output: Contribution to report/book/conference proceedingsIn-proceedings paperpeer-review

  54. Effect of ionic strength on the transport parameters of tritiated water, iodide and H14CO3- in Boom Clay

    Aertsens, M., De Cannière, P., Moors, H., Van Gompel, M., Valcke, E., Mariën, A. & Maes, N., Dec 2009, Scientific Basis for Nuclear Waste Management XXXIII. Symposium Proceedings. Volume 1193. Warrendale, PA, United States, p. 497-504 (Materials Research Society proceedings; no. Volume 1193).

    Research output: Contribution to report/book/conference proceedingsIn-proceedings paperpeer-review

  55. Effects of quorum sensing on the spoilage of food by Serratia plymuthica

    Wevers, E., Moons, P., Van Houdt, R., Aertsen, A., Michiels, C. W. & Moors, H., Oct 2007, Communications in Agricultural and Applied Biological Science. Ghent, Belgium, p. 331-334 (Communications in Agricultural and Applied Biological Science; no. 72(1)).

    Research output: Contribution to report/book/conference proceedingsIn-proceedings paperpeer-review

  56. Engineering Geology. Special issue. Electrokinetic remediation - EREM 2003

    Maes, N. & Moors, H., Mar 2005, Engineering Geology (vol 77, Issues 3-4, Pages 189-368, March 2005). Mol, Belgium, p. 368

    Research output: Contribution to report/book/conference proceedingsIn-proceedings paperpeer-review

  57. Impact of alignment algorithms on 16S metagenomics analysis

    Ahmed, M. M., Shahin, M., Monsieurs, P. & Ramakrishnan, A., 30 Jan 2018, Proceedings of the 8th Cairo International Biomedical Engineering Conference (CIBEC). IEEE - Institute of Electrical and Electronics Engineers, p. 19-21 3 p.

    Research output: Contribution to report/book/conference proceedingsIn-proceedings paperpeer-review

  58. Chapter › Research › Peer-reviewed
  59. Adaptation to Xenobiotics and Toxic Compounds by Cupriavidus and Ralstonia with Special Reference to Cupriavidus metallidurans CH34 and Mobile Genetic Elements

    Mergeay, M. & Van Houdt, R., Jan 2014, Biodegradative Bacteria. How Bacteria Degrade, Survive, Adapt, and Evolve. 1 ed. Tokyo, Japan: Springer, p. 105-127

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  60. BIOSMHARS: Biocontamination specific modelling in habitats related to space

    Berthier, A., Leys, N., Van Houdt, R., Tikhomirov, A., Novikova, N., Ilyin, V., Kulmala, I., Lehtimäki, M., Kokkonen, E., Pasanen, P., Abaibou, H. & Mastroleo, F., Jul 2012, Let’s Embrace Space. 1 ed. Luxembourg, Luxembourg: EC - European Commission, Vol. 2. p. 278-284 (Let's Embrace Space; no. volume 2).

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  61. Chapter 4 - Molecular techniques for understanding microbial abundance and activity in clay barriers used for geodisposal

    Mijnendonckx, K., Leys, N. & Monsieur, P., 1 Jan 2021, The Microbiology of Nuclear Waste Disposal. Elsevier, p. 71-96 26 p.

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  62. Genomic Context of Metal Response Genes in Cupriavidus metallidurans with a Focus on Strain CH34

    Van Houdt, R. & Mergeay, M., Jul 2015, Metal Response in Cupriavidus metallidurans, Volume I: From Habitats to Genes and Proteins. 1 ed. Switzerland: Springer, p. 21-44 (SpringerBriefs in Biometals).

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  63. Gravitational Cell Biology

    Boonstra, J., Bradamante, S., Colige, A. C., Hemmersbach, R., Lambert, C. A., Leys, N., van Loon, J. J. W. A., Nusgens, B. V. & Mastroleo, F., Dec 2011, Laboratory Science with Space Data. 1 ed. Heidelberg, Germany: Springer, Vol. 1. p. 107-112

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  64. Megaplasmids in Cupriavidus Genus and Metal Resistance

    Mergeay, M., Monchy, S., Janssen, P., Van Houdt, R., Leys, N. & Monsieurs, P., 1 Jan 2009, Microbial Megaplasmids. 1 ed. Berlin Heidelberg, Germany: Springer, Vol. 1. p. 209-238 (Microbiology Monographs; no. 11).

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  65. Microbiology Astrobiology

    Mastroleo, F., Leys, N. & Van Houdt, R., 15 Jun 2015, Generation and applications of Extra-terrestrial environments on Earth. 1 ed. Aalborg Ø, Denmark: River publishers, Vol. 1. p. 221-232 (Rivers publishers in standardisation; no. Volume 6).

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  66. Monitoring the microbial burden in manned space stations

    Van Houdt, R. & Leys, N., 1 Jan 2020, Stress Challenges and Immunity in Space: From Mechanisms to Monitoring and Preventive Strategies. Choukér, A. (ed.). 2nd ed. Springer International Publishing, p. 463-475 13 p.

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  67. Monitoring the Microbial Burden in Manned Space Stations

    Van Houdt, R., Leys, N. & Mastroleo, F., Jan 2012, Stress Challenges and Immunity in Space. 1 ed. Heidelberg, Germany: Springer, p. 299-308

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  68. Organic materials and their microbial fate in radioactive waste

    Mijnendonckx, K., Bassil, N. M., Nixon, S. & Boylan, A., 1 Jan 2021, The Microbiology of Nuclear Waste Disposal. 2021 ed. Elsevier, p. 213-244 32 p.

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  69. Plasmids as secondary chromosomes

    Van Houdt, R. & Mergeay, M., Oct 2012, Molecular Life Sciences: An Encyclopedic Reference. 1 ed. Germany: Springer, Vol. 12. p. 1-4

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  70. Quorum sensing in life support systems: The MELiSSA loop

    Condori Catachura, S., Leys, N. & Mastroleo, F., 12 Aug 2018, Quorum Sensing and its Biotechnological Applications. Springer Singapore, p. 249-260 12 p.

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  71. Silver as an Antimicrobial Agent: The Resistance Issue

    Mijnendonckx, K. & Van Houdt, R., 31 May 2017, Silver Nanoparticles for Antibacterial Devices. Cao, H. (ed.). Taylor & Francis (CRC), p. 165- 23 p.

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  72. Spaceflight environment

    Leys, N., Allen, C. S., Giraudo, M. & Moratti, C., 17 Nov 2017, Space safety and human environment. Amsterdam: Elsevier, p. 87-138 52 p.

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  73. Sulphur-related issues in deep underground nuclear waste disposal systems

    De Cannière, P., Kursten, B., Druyts, F., Moors, H. & Gens, R., Sep 2011, Sulphur-assisted corrosion in nuclear disposal systems. 1 ed. Leeds, United Kingdom: Taylor & Francis (CRC), p. 165-169 (European Federation of Corrosion Publications; no. Number 59).

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  74. The Tn4371 ICE Family of Bacterial Mobile Genetic Elements

    Van Houdt, R., Toussaint, A., Ryan, M. P., Pembroke, J. T., Mergeay, M., Adley, C. C. & Monsieurs, P., Jun 2011, Bacterial Integrative Mobile Genetic Elements. 1 ed. Austin, United States: Taylor & Francis (CRC), p. 1-22 (Intelligence Unit).

    Research output: Contribution to report/book/conference proceedingsChapterpeer-review

  75. Literature review › Research
  76. Development of Nitrogen Recycling Strategies for Bioregenerative Life Support Systems in Space

    Verbeelen, T., Leys, N., Ganigué, R. & Mastroleo, F., 13 Oct 2021, In: Frontiers in Microbiology. p. 1-17 17 p., 700810.

    Research output: Contribution to journalLiterature reviewpeer-review

  77. Food Supplements to Mitigate Detrimental Effects of Pelvic Radiotherapy

    Segers, C., Verslegers, M., Baatout, S., Leys, N., Lebeer, S. & Mastroleo, F., 3 Apr 2019, In: Microorganisms. 7, 4, p. 1-29 29 p., 97.

    Research output: Contribution to journalLiterature reviewpeer-review

  78. Potential of higher plants, algae, and cyanobacteria for remediation of radioactively contaminated waters

    Vanhoudt, N., Vandenhove, H., Leys, N. & Janssen, P., 1 Sep 2018, In: Chemosphere. 207, p. 239-254 16 p.

    Research output: Contribution to journalLiterature reviewpeer-review

  79. The impact of insertion sequences on bacterial genome plasticity and adaptability

    Vandecraen, J., Chandler, M., Aertsen, A. & Van Houdt, R., 13 Apr 2017, In: Critical Reviews in Microbiology. 43, 6, p. 709-730

    Research output: Contribution to journalLiterature reviewpeer-review

  80. Special issue › Research
  81. Fifteen years of microbiological investigation in Opalinus Clay at the Mont Terri rock laboratory (Switzerland)

    Moors, H., Leys, N., Leupin, O. X., Bernier-Latmani, R., Bagnoud, A., Wouters, K. & Stroes-Gascoyne, S., 24 Feb 2017, In: Swiss Journal of Geosciences. 110, S1, p. 343–354 13 p.

    Research output: Contribution to journalSpecial issuepeer-review

  82. Unintentional Genomic Changes Endow Cupriavidus metallidurans with an Augmented Heavy-Metal Resistance

    Millacura, F. A., Janssen, P., Monsieurs, P., Janssen, A., Provoost, A., Van Houdt, R. & Rojas, L. A., 13 Nov 2018, In: Genes. 9, 24 p., 551.

    Research output: Contribution to journalSpecial issuepeer-review

  83. Use of Photobioreactors in Regenerative Life Support Systems for Human Space Exploration

    Fahrion, J., Mastroleo, F., Gilles, D. & Leys, N., 29 Jun 2021, In: Frontiers in Microbiology. 12, p. 1-14 14 p., 699525.

    Research output: Contribution to journalSpecial issuepeer-review

  84. Article › Research
  85. Cupriavidus metallidurans strains with different mobilomes and from distinct environments have comparable phenomes

    Van Houdt, R., Provoost, A., Van Assche, A., Leys, N., Lievens, B., Mijnendonckx, K. & Monsieurs, P., 18 Oct 2018, In: Genes. 9, 10, 23 p., 507.

    Research output: Contribution to journalArticlepeer-review

  86. A “Refined Hydrogen Rule” and a “Refined Hydrogen and Halogen Rule” for Organic Molecules

    Claesen, J., Valkenborg, D. & Burzykowski, T., 2 Jan 2020, In: Journal of Mass Spectrometry. 31, 1, p. 132-136 5 p.

    Research output: Contribution to journalArticlepeer-review

  87. A Conceptual Framework for Abundance Estimation of Genomic Targets in the Presence of Ambiguous Short Sequencing Reads

    Górzcak, K., Claesen, J. & Burzykowski, T., 31 Dec 2019, In: Journal of Computational Biology. 27, 0, p. 1-16 16 p.

    Research output: Contribution to journalArticlepeer-review

  88. A molecular toolbox to estimate the number and diversity of Variovorax in the environment: application in soils treated with the phenylurea herbicide linuron

    Bers, K., Sniegowski, K., Albers, P., Breugelmans, P., Hendrickx, L., De Mot, R. & Springael, D., 1 Apr 2011, In: FEMS Microbiology Ecology. 76, 1, p. 14-25 12 p.

    Research output: Contribution to journalArticlepeer-review

  89. A PKS/NRPS/FAS Hybrid Gene Cluster from Serratia plymuthica RVH1 Encoding the Biosynthesis of Three Broad Spectrum, Zeamine-Related Antibiotics

    Masschelein, J., Mattheus, W., Gao, L-J., Moons, P., Van Houdt, R., Uytterhoeven, B., Lamberigts, C., Lescinier, E., Rozenski, J., Herdewijn, P., Aertsen, A., Michiels, C. & Lavigne, R., 17 Jan 2013, In: PLOS ONE. 8, 1, p. 54143-54143

    Research output: Contribution to journalArticlepeer-review

  90. Absolute quantification of microbial taxon abundances.

    Props, R., Monsieurs, P., Kerckhof, FM., Rubbens, P., De, V. J., Hernandez, S. E., Waegeman, J., Hammes, F. & Boon, N., 1 Feb 2017, In: The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 11, February 2017, p. 584-587 4 p.

    Research output: Contribution to journalArticlepeer-review

  91. Accurate prediction of metagenome‑assembled genome completeness by MAGISTA, a random forest model built on alignment‑free intra‑bin statistics

    Goussarov, G., Claesen, J., Ahmed, M., Leys, N., Vandamme, P. & Van Houdt, R., 5 Mar 2021, In: Environmental Microbiome. 17, 9, p. 1-13 13 p.

    Research output: Contribution to journalArticlepeer-review

  92. Adaptation of Cupriavidus metallidurans CH34 to Toxic Zinc Concentrations Involves an Uncharacterized ABC-Type Transporter

    Van Houdt, R., Vandecraen, J., Leys, N., Monsieurs, P. & Aertsen, A., 2 Feb 2021, In: Microorganisms. 9, 2, p. 1-14 14 p., 9020309.

    Research output: Contribution to journalArticlepeer-review

  93. Alveolar epithelium protects macrophages from quorum sensing-induced cytotoxicity in a three-dimensional co-culture model

    Crabbé, A., Sarker, S., Van Houdt, R., Ott, M., Leys, N., Cornelis, P., Nickerson, C. & Monsieurs, P., Mar 2011, In: Cellular Microbiology. 13, 3, p. 469-481

    Research output: Contribution to journalArticlepeer-review

  94. An efficient DNA isolation protocol for filamentous cyanobacteria of the genus Arthrospira

    Morin, N., Vallaeys, T., Hendrickx, L., Leys, N. & Wilmotte, A., 4 Jan 2010, In: Journal of Microbiological Methods. 80, 2, p. 148-154

    Research output: Contribution to journalArticlepeer-review

  95. Antimicrobial efficacy against Pseudomonas aeruginosa biofilm formation in a three-dimensional lung epithelial model and the influence of fetal bovine serum

    Crabbé, A., Liu, Y., Matthijs, N., Rigole, P., De La Fuente-Nùñez, C., Davis, R., Ledesma, M. A., Sarker, S., Van Houdt, R., Hancock, R. E. W., Coenye, T. & Nickerson, C. A., 3 Mar 2017, In: Scientific Reports. 7, p. 1-13 13 p., 43321.

    Research output: Contribution to journalArticlepeer-review

  96. Antimicrobial silver: uses, toxicity and potential for resistance

    Mijnendonckx, K., Leys, N., Mahillon, J., Silver, S. & Van Houdt, R., Jun 2013, In: Biometals. 26, 3, p. 1-15

    Research output: Contribution to journalArticlepeer-review

  97. Arthrospira - a multitalented microalga

    Janssen, P., Monsieurs, P., Vandenhove, H. & Massaut, V., 30 Apr 2014, In: International Innovation. 134, p. 58-60

    Research output: Contribution to journalArticlepeer-review

  98. Assessing the Impact of Flavophospholipol and Virginiamycin Supplementation on the Broiler Microbiota - a Prospective Controlled Intervention Study

    Ahmed, M., Berkell, M., Xavier, B., De Backer, S., Lammens, C. & Hautekiet, V., 31 Aug 2021, In: mSystems. 6, 4, p. 1-16 16 p., e00381-21.

    Research output: Contribution to journalArticlepeer-review

  99. Bacillus thuringiensis conjugation in simulated microgravity

    Beuls, E., Van Houdt, R., Leys, N., Dijkstra, C., Larkin, O., Mahillon, J. & Mijnendonckx, K., 21 Oct 2009, In: Astrobiology. 9, 8, p. 797-805

    Research output: Contribution to journalArticlepeer-review

  100. BacPipe: A rapid, user-friendly whole genome sequencing pipeline for clinical diagnostic bacteriology

    Xavier, B. B., Ahmed, M., Bolzan, M., Ribeiro-Gonçalves, B., Alako, B. T. F., Harrison, P., Lammens, C., Kumar-Singh, S., Goossens, H., Carriço, J. A., Cochrane, G. R. & Malhotra-kumar, S., 9 Dec 2019, In: iScience. 23, 100769, p. 1-28 28 p., 100767.

    Research output: Contribution to journalArticlepeer-review

  101. Biodegradability of dissolved organic matter in Boom Clay pore water under nitrate-reducing conditions: Effect of additional C and P sources

    Bleyen, N., Hendrix, K., Moors, H., Durce, D., Vasile, M. & Valcke, E., 2 May 2018, In: Applied Geochemistry. 92, p. 45-58 14 p.

    Research output: Contribution to journalArticlepeer-review

  102. Biofilm formation and the food industry, a focus on the bacterial outer surface

    Van Houdt, R. & Michiels, C. W., Oct 2010, In: Journal of Applied Microbiology. 109, 4, p. 1117-1131

    Research output: Contribution to journalArticlepeer-review

  103. Biological removal of 17a-ethinylestradiol by a nitrifier enrichment culture in a membrane bioreactor

    De Gusseme, B., Pycke, B., Hennebel, T., Marcoen, A., Vlaeminck, S. E., Noppe, H., Boon, N., Verstraete, W. & Van Houdt, R., Feb 2009, In: Water Research. 43, 9, p. 2493-2503

    Research output: Contribution to journalArticlepeer-review

  104. BioRock: new experiments and hardware to investigate microbe–mineral interactions in space

    Loudon, C-M., Nicholson, N., Finster, K., Leys, N., Byloos, B., Van Houdt, R., Rettberg, P., Moeller, R., Fuchs, F., Demets, R., Krause, J., Vukich, M., Mariani, A. & Cockell, C., 1 Oct 2018, In: International Journal of Astrobiology. 17, 4, p. 303-313 11 p.

    Research output: Contribution to journalArticlepeer-review

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