Microbiology

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  1. Article › Research
  2. Integrated regulation of acetoin fermentation by quorum sensing and pH in Serratia plymuthica RVH1

    Moons, P., Van Houdt, R., Vivijs, B., Michiels, C. & Aertsen, A., May 2011, In: Applied and Environmental Microbiology. 77, 10, p. 3422-3427

    Research output: Contribution to journalArticlepeer-review

  3. Intensity modulated radiotherapy induces pro-inflammatory and pro-survival responses in prostate cancer patients

    El Saghire, H., Vandevoorde, C., Ost, P., Monsieurs, P., Michaux, A., De Meerleer, G., Baatout, S. & Thierens, H., Feb 2014, In: International Journal of Oncology. 44, 4, p. 1073-1083

    Research output: Contribution to journalArticlepeer-review

  4. Intestinal mucositis precedes dysbiosis in a mouse model for pelvic irradiation

    Segers, C., Ahmed, M., Claesen, J., Baatout, S., Leys, N., Lebeer, S., Verslegers, M. & Mastroleo, F., 10 Jun 2021, In: ISME Communications. 1, p. 1-10 10 p., 24.

    Research output: Contribution to journalArticlepeer-review

  5. Intrapulmonary percussive ventilation improves lung function in cystic fibrosis patients chronically colonized with Pseudomonas aeruginosa: a pilot cross-over study

    Dingemans, J., Eyns, H., Willekens, J., Monsieurs, P., Van Houdt, R., Cornelis, P., Malfroot, A. & Crabbé, A., 20 Mar 2018, In: European Journal of Clinical Microbiology & Infectious Diseases. 37, p. 1143-1151 8 p.

    Research output: Contribution to journalArticlepeer-review

  6. Introduction to the principles and methods underlying the recovery of metagenome‐assembled genomes from metagenomic data

    Goussarov, G., Ahmed, M., Vandamme, P. & Van Houdt, R., 9 Jun 2022, In: Microbiology Open. 11, 3, p. 1-19 19 p., e1298.

    Research output: Contribution to journalArticlepeer-review

  7. IPED: a highly efficient denoising tool for Illumina MiSeq Paired-end 16S rRNA gene amplicon sequencing data

    Ahmed, M., Leys, N., Raes, J. & Monsieurs, P., 29 Apr 2016, In: BMC Bioinformatics. 17, p. 192:1-192:11 11 p.

    Research output: Contribution to journalArticlepeer-review

  8. Irradiation at Ultra-high (FLASH) Dose Rates Reduces Acute Normal Tissue Toxicity in the Mouse Gastrointestinal System

    Ruan, J-L., Lee, C., Wouters, S., Tullis, I. D. C., Verslegers, M., Ahmed, M. M., Then, C. K., Smart, S. C., Hill, M. A., Muschel, R. J., Giaccia, A. J., Vojnovic, B., Kiltie, A. E. & Petersson, K., 1 Dec 2021, In: International Journal of Radiation Oncology, Biology, Physics. 111, 5, p. 1250-1261 12 p.

    Research output: Contribution to journalArticlepeer-review

  9. Lead(II) resistance in Cupriavidus metallidurans CH34: interplay between plasmid and chromosomally-located functions

    Taghavi, S., Lesaulnier, C., Monchy, S., Wattiez, R., Mergeay, M. & van der Lelie, D., 1 Aug 2009, In: Antonie van Leeuwenhoek. 96, 2, p. 171-182

    Research output: Contribution to journalArticlepeer-review

  10. Limnospira indica PCC 8005 or Lacticaseibacillus rhamnosus GG Dietary Supplementation Modulate the Gut Microbiome in Mice

    Segers, C., Ahmed, M., Coolkens, A., Baatout, S., Leys, N., Lebeer, S., Verslegers, M. & Mastroleo, F., 31 Aug 2022, In: Applied Microbiology. 2, 3, p. 636-650 15 p., 1030049.

    Research output: Contribution to journalArticlepeer-review

  11. Limnospira indica PCC8005 growth in photobioreactor: model and simulation of the ISS and ground experiments

    Poughon, L., Laroche, C., Creuly, C., Paillé, C., Lasseur, C., Monsieurs, P., Heylen, W., Coninx, I., Mastroleo, F. & Leys, N., 1 May 2020, In: Life Sciences in Space Research. 25, p. 53-65 13 p.

    Research output: Contribution to journalArticlepeer-review

  12. Loss of Furin in β cells Induces an mTORC1-ATF4 Anabolic Pathway that Leads to β cell Dysfunction

    Brouwers, B., Coppola, I., Vints, K., Dislich, B., Van Lommel, L., Segers, C., Gounko, N. V., Thorrez, L., Schuit, F., Lichtenthaler, S. F., Estall, J. L., Declercq, J., Ramos-Molina, B. & Creemers, J. W. M., 4 Dec 2020, In: Diabetes. 70, 2, p. 492-503 12 p., db200474.

    Research output: Contribution to journalArticlepeer-review

  13. Low dose irradiation of thyroid cells reveals a unique transcriptomic and epigenetic signature in RET/PTC-positive cells

    Abouelaradat, K., Monsieurs, P., Anastasov, N., Atkinson, M., Derradji, H., De Meyer, T., Bekaert, S., Van Criekinge, W. & Baatout, S., Mar 2012, In: Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis. 731, 1-2, p. 27-40

    Research output: Contribution to journalArticlepeer-review

  14. Measuring the biodiversity of microbial communities by flow cytometry

    Props, R., Monsieurs, P., Ahmed, M., Clement, L. & Boon, N., 1 Nov 2016, In: Methods in Ecology and Evolution. 7, 11, p. 1376-1385

    Research output: Contribution to journalArticlepeer-review

  15. Measuring the effective diffusion coefficient of dissolved hydrogen in saturated Boom Clay

    Jacops, E., Wouters, K., Volckaert, G., Moors, H., Maes, N., Bruggeman, C., Swennen, R. & Littke, R., Oct 2015, In: Applied Geochemistry. 61, p. 175-184

    Research output: Contribution to journalArticlepeer-review

  16. Mechanisms of gold biomineralization in the bacterium Cupriavidus metallidurans

    Reith, F., Etschmann, B., Grosse, C., Moors, H., Benotmane, R., Monsieurs, P., Grass, G., Doonan, C., Vogt, S., Lai, B., Martinez-Criado, G., George, G. N., Nies, D. H., Mergeay, M., Pring, A., Southam, G. & Brugger, J., 20 Oct 2009, In: Proceedings of the National Academy of Sciences of the United States of America. 106, 42, p. 17757-17762

    Research output: Contribution to journalArticlepeer-review

  17. Media Ion Composition Controls Regulatory and Virulence Response of Salmonellain Spaceflight

    Wilson, J., Ott, M., Quick, L., Davis, R., Höner zu Bentrup, K., Crabbé, A., Richter, E., Sarker, S., Barrila, J., Porwollik, S., Cheng, P., McClelland, M., Tsapraillis, G., Radabaugh, T., Hunt, A., Shah, M., Nelman-Gonzalez, M., Hing, S., Perra, M., Dumars, P. & 22 others, Norwood, K., Bober, R., Devich, J., Ruggles, A., CdeBaca, A., Narayan, S., Benjamin, J., Goulart, C., Rupert, M., Catella, L., Schurr, M., Buchanan, K., Morici, L., McCracken, J., Porter, M., Pierson, D., Smith, S., Mergeay, M., Leys, N., Stefanyshyn-Piper, H., Gorie, D. & Nickerson, C., Dec 2008, In: PLOS ONE. 3, 12, p. e3923-e3923

    Research output: Contribution to journalArticlepeer-review

  18. Meta-Analysis of RNA-Seq Datasets Identifies Novel Players in Glioblastoma

    Sallam, M., Ahmed, M., Baatout, S., Guns, P-J., Ramadan, R. & Benotmane, R., 24 Nov 2022, In: Cancers. 14, 23, p. 1-21 21 p., 5788.

    Research output: Contribution to journalArticlepeer-review

  19. Metaproteomics, heterotrophic growth, and distribution of nitrosomonas europaea and nitrobacter winogradskyi after long-term operation of an autotrophic nitrifying biofilm reactor

    Mastroleo, F., Arnau, C., Verbeelen, T., Ahmed, M., Gòdia, F., Leys, N. & Van Houdt, R., 9 Mar 2022, In: Applied Microbiology. 2, 1, p. 272-287 16 p., 201002.

    Research output: Contribution to journalArticlepeer-review

  20. Microarray analysis of a microbe–mineral interaction

    Olsson-Francis, K., Van Houdt, R., Mergeay, M., Leys, N., Cockell, C. S. & Moors, H., Dec 2010, In: Geobiology. 8, 5, p. 446-456

    Research output: Contribution to journalArticlepeer-review

  21. Microarray gene expression analysis Highlights Different Profiles in Whole Blood Samples X-Irradiated with Low and High Doses

    El Saghire, H., Thierens, H., Monsieurs, P., Michaux, A., Vandevoorde, C., Vanmarcke, H. & Baatout, S., Apr 2013, In: Annalen van de Belgische Vereniging voor Stralingsbescherming / Annales de l'association Belge de radioprotection. 38, 3, p. 279-287

    Research output: Contribution to journalArticlepeer-review

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