Microbiology

Organisational unit: Unit

  1. 2017
  2. Antimicrobial efficacy against Pseudomonas aeruginosa biofilm formation in a three-dimensional lung epithelial model and the influence of fetal bovine serum

    Crabbé, A., Liu, Y., Matthijs, N., Rigole, P., De La Fuente-Nùñez, C., Davis, R., Ledesma, M. A., Sarker, S., Van Houdt, R., Hancock, R. E. W., Coenye, T. & Nickerson, C. A., 3 Mar 2017, In: Scientific Reports. 7, p. 1-13 13 p., 43321.

    Research output: Contribution to journalArticlepeer-review

  3. Fifteen years of microbiological investigation in Opalinus Clay at the Mont Terri rock laboratory (Switzerland)

    Moors, H., Leys, N., Leupin, O. X., Bernier-Latmani, R., Bagnoud, A., Wouters, K. & Stroes-Gascoyne, S., 24 Feb 2017, In: Swiss Journal of Geosciences. 110, S1, p. 343–354 13 p.

    Research output: Contribution to journalSpecial issuepeer-review

  4. Absolute quantification of microbial taxon abundances.

    Props, R., Monsieurs, P., Kerckhof, FM., Rubbens, P., De, V. J., Hernandez, S. E., Waegeman, J., Hammes, F. & Boon, N., 1 Feb 2017, In: The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 11, February 2017, p. 584-587 4 p.

    Research output: Contribution to journalArticlepeer-review

  5. From reads to operational taxonomic units: an ensemble processing pipeline for MiSeq amplicon sequencing data. OCToPUS 16s Metagenomic pipeline

    Ahmed, M. M., Njima, M., Leys, N., Raes, J. & Monsieurs, P., 1 Feb 2017, In: GigaScience. 6, 1-10, p. 1-10 10 p.

    Research output: Contribution to journalArticlepeer-review

  6. Paleomicrobiology to investigate copper resistance in bacteria: isolation and description of Cupriavidus necator B9 in the soil of a medieval foundry

    Gillan, D. C., Van Camp, C., Mergeay, M., Provoost, A., Thomas, N., Vermard, L., Billon, G. & Wattiez, R., 27 Jan 2017, In: Environmental Microbiology. 19, 2, p. 770-787 7 p.

    Research output: Contribution to journalArticlepeer-review

  7. 2016
  8. Measuring the biodiversity of microbial communities by flow cytometry

    Props, R., Monsieurs, P., Ahmed, M., Clement, L. & Boon, N., 1 Nov 2016, In: Methods in Ecology and Evolution. 7, 11, p. 1376-1385

    Research output: Contribution to journalArticlepeer-review

  9. Book of abstracts Day of the PhD's October 27, 2016

    Belmans, N., Ali, M. M., Baselet, B., Byloos, B., Mbouombouo Mfossa, A. C., Van Eesbeeck, V., Yadav, A. & Baatout, S., 27 Oct 2016, Studiecentrum voor Kernenergie. (SCK•CEN Reports; no. SCK•CEN BA-0083)

    Research output: Report/bookBook of abstractspeer-review

  10. Reevaluating multicolor flow cytometry to assess microbial viability

    Buysschaert, B., Byloos, B., Leys, N., Van Houdt, R. & Boon, N., 1 Sep 2016, In: Applied Microbiology and Biotechnology. 100, p. 9037-9051 15 p.

    Research output: Contribution to journalArticlepeer-review

  11. Effect of Shear Stress on Pseudomonas aeruginosa Isolated from the Cystic Fibrosis Lung

    Dingemans, J., Monsieurs, P., Yu, S-H., Crabbé, A., Förstner, K. U., Malfroot, A., Cornelis, P. & Van Houdt, R., 2 Aug 2016, In: mBio. 7, 4, 16 p., e00813-16.

    Research output: Contribution to journalArticlepeer-review

  12. IPED: a highly efficient denoising tool for Illumina MiSeq Paired-end 16S rRNA gene amplicon sequencing data

    Ahmed, M., Leys, N., Raes, J. & Monsieurs, P., 29 Apr 2016, In: BMC Bioinformatics. 17, p. 192:1-192:11 11 p.

    Research output: Contribution to journalArticlepeer-review

  13. Rock geochemistry induces stress and starvation responses in the bacterial proteome

    Leys, N., Bryce, C. C., Le Bihan, T., Martin, S. F., Bush, T., Spears, B., Moore, A., Byloos, B. & Cockell, C. S., 1 Apr 2016, In: Environmental Microbiology. 18, 4, p. 1110-1121 12 p.

    Research output: Contribution to journalArticlepeer-review

  14. Zinc-Induced Transposition of Insertion Sequence Elements Contributes to Increased Adaptability of Cupriavidus metallidurans

    Vandecraen, J., Monsieurs, P., Mergeay, M., Leys, N., Aertsen, A. & Van Houdt, R., 23 Mar 2016, In: Frontiers in Microbiology. 7, p. 1-16 16 p., 359.

    Research output: Contribution to journalArticlepeer-review

  15. Conjugative transfer of broad host range plasmids to an acidobacterial strain, Edaphobacter aggregans

    Bouhajja, E., Efthymiopoulus, T., George, I. F., Moreels, D., Van Houdt, R., Mergeay, M. & Agathos, S. N., 22 Jan 2016, In: Journal of Biotechnology. 221, p. 107-113

    Research output: Contribution to journalArticlepeer-review

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